Plot ERVISS data — plot_erviss_data • ervissexplore

Creates a ggplot2 visualization of ERVISS data, with facets by country. This is a generic function that can plot any of the available data types.

Usage

plot_erviss_data(
  data,
  type = ERVISS_TYPES,
  date_breaks = NULL,
  date_format = "%b %Y"
)

Arguments

data: A data.table or data.frame containing ERVISS data, typically output from get_erviss_data.
type: Type of data. One of: "positivity", "variants", "ili_ari_rates", "sari_rates", "sari_positivity", "nonsentinel_severity", "nonsentinel_tests".
date_breaks: A string specifying the date breaks for the x-axis (e.g., "1 month", "2 weeks"). If NULL, a sensible default is chosen based on the data type.
date_format: A string specifying the date format for x-axis labels (e.g., "%b %Y" for "Jan 2024")

Value

A ggplot2 object

Examples

# \donttest{
# Plot positivity data
data <- get_erviss_data("positivity",
  date_min = as.Date("2024-01-01"),
  date_max = as.Date("2024-06-30"),
  pathogen = "SARS-CoV-2"
)
plot_erviss_data(data, type = "positivity")


# Plot ILI/ARI rates
data <- get_erviss_data("ili_ari_rates",
  date_min = as.Date("2024-01-01"),
  date_max = as.Date("2024-06-30"),
  indicator = "ILIconsultationrate"
)
plot_erviss_data(data, type = "ili_ari_rates")

# }