Package index
-
AERparams - Dataset describing the parameters for the epidemiological report production
-
DENGUE2019 - Dataset including Dengue data for 2015-2019
-
EcdcColors() - Colour palettes following the March 2018 ECDC guidelines for presentation of surveillance data
-
MSCode - Dataset correspondence table between country names and country code
-
SALM2016 - Dataset including Salmonellosis data for 2012-2016
-
body_replace_gg_at_bkm() - Replace a plot at a bookmark location
-
cleanECDCTable() - Cleaning the final table
-
cleanMeasureCode() - Clean the MeasureCode variable
-
filterDisease() - Filter disease parameters
-
getAER() - Get full disease-specific epidemiological report
-
getAgeGender() - Get disease-specific age and gender bar graph
-
getMap() - Get disease-specific map: distribution of cases by Member State
-
getSeason() - Get disease-specific seasonality graph: distribution of cases by month
-
getTableByMS() - Get disease-specific table: distribution of cases by Member State (GeoCode)
-
getTemplate() - Get epidemiological report (empty) template
-
getTrend() - Get disease-specific trend plot: trend and number of cases by month
-
includeMap() - Including PNG map in the 'Microsoft Word' template
-
orderQuasinum() - Order 'quasinumerical' categorical vectors (increasing order)
-
plotAge() - Age bar graph
-
plotAgeGender() - Age and Gender bar graph
-
plotBar() - Bar graph
-
plotBarGrouped() - Grouped bar graph
-
plotBarGroupedH() - Horizontal grouped bar graph
-
plotBarH() - Horizontal bar graph
-
plotPie() - Pie chart
-
plotSeasonality() - Seasonality line graph
-
plotTS() - Time series plot
-
plotTS12MAvg() - Time series with 12-month moving average
-
plotTSGrouped() - Multiple time series plot
-
previewMap() - Previewing the PNG map
-
shapeECDCFlexTable() - Shaping the final table (layout, title, color, font)
-
toCapTitle() - Capitalise first letter